response: (chd1 %in% c('1','2')) 
covariates: dsmoker 
SNP: CELSR2_MG_438 
Call:
coxph(formula = y[notmissing] ~ allele[notmissing] + wz[notmissing, 
    selectedcovariates] + wruaco[notmissing] + strata(wsex[notmissing]) + 
    cluster(wdata$id[notmissing]), weights = weight[notmissing], 
    robust = TRUE)

  n= 3083 
                                       coef exp(coef) se(coef) robust se
allele[notmissing]                  0.00279     1.003   0.0546    0.0683
wz[notmissing, selectedcovariates]  0.49898     1.647   0.0755    0.1012
wruaco[notmissing]FIN-EAS_03        0.73278     2.081   0.1292    0.1622
wruaco[notmissing]FIN-EAS_24        0.32040     1.378   0.1144    0.1451
wruaco[notmissing]FIN-WES_03        0.24810     1.282   0.1419    0.1761
wruaco[notmissing]FIN-WES_24        0.17375     1.190   0.1255    0.1622
wruaco[notmissing]FRA-LIL_21       -0.22011     0.802   0.2207    0.2959
wruaco[notmissing]FRA-STR_21       -0.04926     0.952   0.1949    0.2476
wruaco[notmissing]FRA-TOU_21        0.01092     1.011   0.1991    0.2596
wruaco[notmissing]SWE-NSW_02        0.47998     1.616   0.2052    0.2550
wruaco[notmissing]SWE-NSW_03       -0.20407     0.815   0.3048    0.3486
wruaco[notmissing]UNK-BEL_21        0.56897     1.766   0.1426    0.1849
                                         z       p
allele[notmissing]                  0.0409 9.7e-01
wz[notmissing, selectedcovariates]  4.9300 8.2e-07
wruaco[notmissing]FIN-EAS_03        4.5179 6.2e-06
wruaco[notmissing]FIN-EAS_24        2.2080 2.7e-02
wruaco[notmissing]FIN-WES_03        1.4087 1.6e-01
wruaco[notmissing]FIN-WES_24        1.0710 2.8e-01
wruaco[notmissing]FRA-LIL_21       -0.7438 4.6e-01
wruaco[notmissing]FRA-STR_21       -0.1990 8.4e-01
wruaco[notmissing]FRA-TOU_21        0.0421 9.7e-01
wruaco[notmissing]SWE-NSW_02        1.8821 6.0e-02
wruaco[notmissing]SWE-NSW_03       -0.5853 5.6e-01
wruaco[notmissing]UNK-BEL_21        3.0766 2.1e-03

                                   exp(coef) exp(-coef) lower .95 upper .95
allele[notmissing]                     1.003      0.997     0.877      1.15
wz[notmissing, selectedcovariates]     1.647      0.607     1.351      2.01
wruaco[notmissing]FIN-EAS_03           2.081      0.481     1.514      2.86
wruaco[notmissing]FIN-EAS_24           1.378      0.726     1.037      1.83
wruaco[notmissing]FIN-WES_03           1.282      0.780     0.907      1.81
wruaco[notmissing]FIN-WES_24           1.190      0.841     0.866      1.64
wruaco[notmissing]FRA-LIL_21           0.802      1.246     0.449      1.43
wruaco[notmissing]FRA-STR_21           0.952      1.050     0.586      1.55
wruaco[notmissing]FRA-TOU_21           1.011      0.989     0.608      1.68
wruaco[notmissing]SWE-NSW_02           1.616      0.619     0.980      2.66
wruaco[notmissing]SWE-NSW_03           0.815      1.226     0.412      1.61
wruaco[notmissing]UNK-BEL_21           1.766      0.566     1.229      2.54

Rsquare= 0.029   (max possible= 0.995 )
Likelihood ratio test= 90.3  on 12 df,   p=4.3e-14
Wald test            = 52.4  on 12 df,   p=5.32e-07
Score (logrank) test = 91.8  on 12 df,   p=2.19e-14,   Robust = 49  p=2.11e-06

  (Note: the likelihood ratio and score tests assume independence of
     observations within a cluster, the Wald and robust score tests do not).

Updated on 2008-06-04