response: (chd2=='1')
covariates: dsmoker
SNP: 10Q11_21_MG_458
Call:
coxph(formula = y[notmissing] ~ allele[notmissing] + wz[notmissing,
selectedcovariates] + wrua2[notmissing] + strata(wsex[notmissing]) +
cluster(wdata$id[notmissing]), weights = weight[notmissing],
robust = TRUE)
n= 2382
coef exp(coef) se(coef) robust se z
allele[notmissing] 0.0412 1.042 0.106 0.120 0.343
wz[notmissing, selectedcovariates] 0.6542 1.924 0.122 0.139 4.699
wrua2[notmissing]FRA -1.2522 0.286 0.381 0.400 -3.128
wrua2[notmissing]SWE -0.3206 0.726 0.257 0.272 -1.180
wrua2[notmissing]UNK -0.2249 0.799 0.318 0.346 -0.650
p
allele[notmissing] 7.3e-01
wz[notmissing, selectedcovariates] 2.6e-06
wrua2[notmissing]FRA 1.8e-03
wrua2[notmissing]SWE 2.4e-01
wrua2[notmissing]UNK 5.2e-01
exp(coef) exp(-coef) lower .95 upper .95
allele[notmissing] 1.042 0.96 0.823 1.319
wz[notmissing, selectedcovariates] 1.924 0.52 1.464 2.527
wrua2[notmissing]FRA 0.286 3.50 0.130 0.627
wrua2[notmissing]SWE 0.726 1.38 0.426 1.236
wrua2[notmissing]UNK 0.799 1.25 0.405 1.573
Rsquare= 0.023 (max possible= 0.881 )
Likelihood ratio test= 54.8 on 5 df, p=1.43e-10
Wald test = 40.4 on 5 df, p=1.25e-07
Score (logrank) test = 51.1 on 5 df, p=8.36e-10, Robust = 44 p=2.28e-08
(Note: the likelihood ratio and score tests assume independence of
observations within a cluster, the Wald and robust score tests do not).
Updated on 2008-06-04