response: (chd3=='1') 
covariates: chdage3 sex nonhdl hdla bmi bpm dsmoker hisdiab1 
SNP: 10Q11_21_MG_458 

Call:
glm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing, 
    ] + rua3[notmissing], family = binomial(link = "logit"))

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-1.5256  -0.9782  -0.6654   1.1984   2.1620  

Coefficients:
                                 Estimate Std. Error z value Pr(>|z|)    
(Intercept)                     -3.497274   1.323685  -2.642 0.008240 ** 
allele[notmissing]               0.012821   0.148939   0.086 0.931403    
z[notmissing, ]1                 0.040748   0.012328   3.305 0.000949 ***
z[notmissing, ]2                -0.252604   0.293012  -0.862 0.388637    
z[notmissing, ]3                -0.161318   0.074590  -2.163 0.030562 *  
z[notmissing, ]4                 0.168669   0.269754   0.625 0.531793    
z[notmissing, ]5                 0.032964   0.020442   1.613 0.106842    
z[notmissing, ]6                 0.001932   0.005943   0.325 0.745079    
z[notmissing, ]7                 0.394751   0.180473   2.187 0.028720 *  
z[notmissing, ]8                -0.033361   0.253975  -0.131 0.895493    
rua3[notmissing]FINRISK         -0.465838   0.217668  -2.140 0.032344 *  
rua3[notmissing]Northern Sweden -0.909639   0.463777  -1.961 0.049836 *  
rua3[notmissing]PRIME / Belfast -0.750786   0.354814  -2.116 0.034345 *  
rua3[notmissing]PRIME / France  -0.963743   0.482282  -1.998 0.045684 *  
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 1031.37  on 791  degrees of freedom
Residual deviance:  963.54  on 778  degrees of freedom
  (15 observations deleted due to missingness)
AIC: 991.54

Number of Fisher Scoring iterations: 4

Updated on 2008-06-04