response: (chd3=='1') 
covariates: chdage3 sex nonhdl hdla bmi bpm dsmoker hisdiab1 
SNP: 19Q12_MG_446 

Call:
glm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing, 
    ] + rua3[notmissing], family = binomial(link = "logit"))

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-1.6181  -0.9620  -0.6627   1.2100   2.2038  

Coefficients:
                                 Estimate Std. Error z value Pr(>|z|)   
(Intercept)                     -3.455821   1.324060  -2.610  0.00905 **
allele[notmissing]               0.267396   0.150735   1.774  0.07607 . 
z[notmissing, ]1                 0.039838   0.012243   3.254  0.00114 **
z[notmissing, ]2                -0.195669   0.290449  -0.674  0.50052   
z[notmissing, ]3                -0.161213   0.074112  -2.175  0.02961 * 
z[notmissing, ]4                 0.198677   0.269646   0.737  0.46124   
z[notmissing, ]5                 0.036917   0.020543   1.797  0.07232 . 
z[notmissing, ]6                 0.002468   0.005928   0.416  0.67720   
z[notmissing, ]7                 0.358512   0.180203   1.989  0.04665 * 
z[notmissing, ]8                -0.082334   0.253627  -0.325  0.74546   
rua3[notmissing]FINRISK         -0.470219   0.216156  -2.175  0.02960 * 
rua3[notmissing]Northern Sweden -0.991479   0.465279  -2.131  0.03309 * 
rua3[notmissing]PRIME / Belfast -0.869718   0.365093  -2.382  0.01721 * 
rua3[notmissing]PRIME / France  -1.016684   0.483273  -2.104  0.03540 * 
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 1034.32  on 793  degrees of freedom
Residual deviance:  963.52  on 780  degrees of freedom
  (15 observations deleted due to missingness)
AIC: 991.52

Number of Fisher Scoring iterations: 4

Updated on 2008-06-04