response: (chd3=='1') 
covariates: chdage3 sex nonhdl hdla bmi bpm dsmoker hisdiab1 
SNP: CELSR2_MG_438 

Call:
glm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing, 
    ] + rua3[notmissing], family = binomial(link = "logit"))

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-1.4810  -0.9747  -0.6742   1.1994   2.1161  

Coefficients:
                                 Estimate Std. Error z value Pr(>|z|)   
(Intercept)                     -3.621788   1.317509  -2.749  0.00598 **
allele[notmissing]               0.113936   0.137122   0.831  0.40602   
z[notmissing, ]1                 0.039737   0.012219   3.252  0.00115 **
z[notmissing, ]2                -0.208393   0.290866  -0.716  0.47371   
z[notmissing, ]3                -0.148805   0.073642  -2.021  0.04332 * 
z[notmissing, ]4                 0.162403   0.269080   0.604  0.54614   
z[notmissing, ]5                 0.033003   0.020383   1.619  0.10541   
z[notmissing, ]6                 0.002629   0.005902   0.445  0.65601   
z[notmissing, ]7                 0.352657   0.178993   1.970  0.04881 * 
z[notmissing, ]8                -0.074074   0.253170  -0.293  0.76984   
rua3[notmissing]FINRISK         -0.462271   0.215853  -2.142  0.03223 * 
rua3[notmissing]Northern Sweden -1.062777   0.488732  -2.175  0.02966 * 
rua3[notmissing]PRIME / Belfast -0.694230   0.346408  -2.004  0.04506 * 
rua3[notmissing]PRIME / France  -1.002804   0.482157  -2.080  0.03754 * 
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 1041.4  on 797  degrees of freedom
Residual deviance:  974.3  on 784  degrees of freedom
  (15 observations deleted due to missingness)
AIC: 1002.3

Number of Fisher Scoring iterations: 4

Updated on 2008-06-04