response: (chd3=='1') 
covariates: chdage3 sex nonhdl hdla bmi bpm dsmoker hisdiab1 
SNP: MIA3_MG_454 

Call:
glm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing, 
    ] + rua3[notmissing], family = binomial(link = "logit"))

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-1.5602  -0.9717  -0.6709   1.1993   2.1849  

Coefficients:
                                 Estimate Std. Error z value Pr(>|z|)   
(Intercept)                     -3.334383   1.325704  -2.515  0.01190 * 
allele[notmissing]               0.125527   0.161811   0.776  0.43789   
z[notmissing, ]1                 0.038055   0.012304   3.093  0.00198 **
z[notmissing, ]2                -0.212428   0.291195  -0.730  0.46569   
z[notmissing, ]3                -0.172005   0.074693  -2.303  0.02129 * 
z[notmissing, ]4                 0.179986   0.270904   0.664  0.50644   
z[notmissing, ]5                 0.032042   0.020409   1.570  0.11642   
z[notmissing, ]6                 0.002934   0.005910   0.496  0.61958   
z[notmissing, ]7                 0.423489   0.180517   2.346  0.01898 * 
z[notmissing, ]8                -0.033640   0.253163  -0.133  0.89429   
rua3[notmissing]FINRISK         -0.444804   0.216880  -2.051  0.04027 * 
rua3[notmissing]Northern Sweden -0.894913   0.463515  -1.931  0.05352 . 
rua3[notmissing]PRIME / Belfast -0.742498   0.354740  -2.093  0.03634 * 
rua3[notmissing]PRIME / France  -0.964279   0.482596  -1.998  0.04571 * 
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 1032.3  on 792  degrees of freedom
Residual deviance:  965.4  on 779  degrees of freedom
  (15 observations deleted due to missingness)
AIC: 993.4

Number of Fisher Scoring iterations: 4

Updated on 2008-06-04