response: hdla
covariates: age1 sex
SNP: 10Q11_21_MG_458
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-0.89579 -0.22325 -0.03859 0.17327 1.89095
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 1.4721455 0.0831942 17.695 < 2e-16
allele[notmissing] 0.0120196 0.0150443 0.799 0.424426
z[notmissing, ]1 -0.0006191 0.0011554 -0.536 0.592115
z[notmissing, ]2 -0.2579239 0.0289184 -8.919 < 2e-16
as.factor(ruaco[notmissing])FIN-EAS_03 0.1074731 0.0343325 3.130 0.001774
as.factor(ruaco[notmissing])FIN-EAS_24 0.0190585 0.0300083 0.635 0.525439
as.factor(ruaco[notmissing])FIN-WES_03 0.0587710 0.0346877 1.694 0.090386
as.factor(ruaco[notmissing])FIN-WES_24 0.1171945 0.0353544 3.315 0.000935
as.factor(ruaco[notmissing])FRA-LIL_21 0.1634345 0.0590766 2.766 0.005725
as.factor(ruaco[notmissing])FRA-STR_21 0.0497300 0.0482124 1.031 0.302458
as.factor(ruaco[notmissing])FRA-TOU_21 0.1099714 0.0571113 1.926 0.054318
as.factor(ruaco[notmissing])SWE-NSW_02 0.1447325 0.0464008 3.119 0.001843
as.factor(ruaco[notmissing])SWE-NSW_03 0.0575010 0.0441639 1.302 0.193088
as.factor(ruaco[notmissing])UNK-BEL_21 -0.0019649 0.0335992 -0.058 0.953372
(Intercept) ***
allele[notmissing]
z[notmissing, ]1
z[notmissing, ]2 ***
as.factor(ruaco[notmissing])FIN-EAS_03 **
as.factor(ruaco[notmissing])FIN-EAS_24
as.factor(ruaco[notmissing])FIN-WES_03 .
as.factor(ruaco[notmissing])FIN-WES_24 ***
as.factor(ruaco[notmissing])FRA-LIL_21 **
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21 .
as.factor(ruaco[notmissing])SWE-NSW_02 **
as.factor(ruaco[notmissing])SWE-NSW_03
as.factor(ruaco[notmissing])UNK-BEL_21
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 0.3305 on 1782 degrees of freedom
Multiple R-squared: 0.09467, Adjusted R-squared: 0.08806
F-statistic: 14.33 on 13 and 1782 DF, p-value: < 2.2e-16
Updated on 2008-06-04