response: hdla
covariates: age1 sex
SNP: 19Q12_MG_446
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-0.88421 -0.22121 -0.04236 0.16833 1.90092
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 1.4585335 0.0832366 17.523 < 2e-16
allele[notmissing] -0.0272161 0.0156307 -1.741 0.081823
z[notmissing, ]1 -0.0007223 0.0011491 -0.629 0.529732
z[notmissing, ]2 -0.2527492 0.0287874 -8.780 < 2e-16
as.factor(ruaco[notmissing])FIN-EAS_03 0.1155310 0.0341129 3.387 0.000723
as.factor(ruaco[notmissing])FIN-EAS_24 0.0257310 0.0300472 0.856 0.391918
as.factor(ruaco[notmissing])FIN-WES_03 0.0633351 0.0344318 1.839 0.066018
as.factor(ruaco[notmissing])FIN-WES_24 0.1127826 0.0348238 3.239 0.001223
as.factor(ruaco[notmissing])FRA-LIL_21 0.1457356 0.0598833 2.434 0.015045
as.factor(ruaco[notmissing])FRA-STR_21 0.0371297 0.0480968 0.772 0.440230
as.factor(ruaco[notmissing])FRA-TOU_21 0.1145868 0.0556106 2.061 0.039494
as.factor(ruaco[notmissing])SWE-NSW_02 0.1482188 0.0459931 3.223 0.001293
as.factor(ruaco[notmissing])SWE-NSW_03 0.0503125 0.0433949 1.159 0.246445
as.factor(ruaco[notmissing])UNK-BEL_21 0.0097490 0.0338130 0.288 0.773135
(Intercept) ***
allele[notmissing] .
z[notmissing, ]1
z[notmissing, ]2 ***
as.factor(ruaco[notmissing])FIN-EAS_03 ***
as.factor(ruaco[notmissing])FIN-EAS_24
as.factor(ruaco[notmissing])FIN-WES_03 .
as.factor(ruaco[notmissing])FIN-WES_24 **
as.factor(ruaco[notmissing])FRA-LIL_21 *
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21 *
as.factor(ruaco[notmissing])SWE-NSW_02 **
as.factor(ruaco[notmissing])SWE-NSW_03
as.factor(ruaco[notmissing])UNK-BEL_21
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 0.3297 on 1774 degrees of freedom
Multiple R-squared: 0.0951, Adjusted R-squared: 0.08847
F-statistic: 14.34 on 13 and 1774 DF, p-value: < 2.2e-16
Updated on 2008-06-04