response: hdla
covariates: age1 sex
SNP: MIA3_MG_454
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-0.87029 -0.22498 -0.04216 0.17297 1.89200
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 1.4667697 0.0828605 17.702 < 2e-16
allele[notmissing] 0.0119744 0.0153093 0.782 0.434220
z[notmissing, ]1 -0.0005074 0.0011484 -0.442 0.658697
z[notmissing, ]2 -0.2442097 0.0288174 -8.474 < 2e-16
as.factor(ruaco[notmissing])FIN-EAS_03 0.1193593 0.0344285 3.467 0.000539
as.factor(ruaco[notmissing])FIN-EAS_24 0.0275102 0.0297629 0.924 0.355449
as.factor(ruaco[notmissing])FIN-WES_03 0.0525172 0.0343732 1.528 0.126727
as.factor(ruaco[notmissing])FIN-WES_24 0.1175548 0.0350147 3.357 0.000804
as.factor(ruaco[notmissing])FRA-LIL_21 0.1653733 0.0587705 2.814 0.004948
as.factor(ruaco[notmissing])FRA-STR_21 0.0586379 0.0484201 1.211 0.226047
as.factor(ruaco[notmissing])FRA-TOU_21 0.1157585 0.0561217 2.063 0.039292
as.factor(ruaco[notmissing])SWE-NSW_02 0.1591651 0.0452535 3.517 0.000447
as.factor(ruaco[notmissing])SWE-NSW_03 0.0548979 0.0436676 1.257 0.208854
as.factor(ruaco[notmissing])UNK-BEL_21 0.0024281 0.0334878 0.073 0.942207
(Intercept) ***
allele[notmissing]
z[notmissing, ]1
z[notmissing, ]2 ***
as.factor(ruaco[notmissing])FIN-EAS_03 ***
as.factor(ruaco[notmissing])FIN-EAS_24
as.factor(ruaco[notmissing])FIN-WES_03
as.factor(ruaco[notmissing])FIN-WES_24 ***
as.factor(ruaco[notmissing])FRA-LIL_21 **
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21 *
as.factor(ruaco[notmissing])SWE-NSW_02 ***
as.factor(ruaco[notmissing])SWE-NSW_03
as.factor(ruaco[notmissing])UNK-BEL_21
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 0.3288 on 1786 degrees of freedom
Multiple R-squared: 0.0908, Adjusted R-squared: 0.08418
F-statistic: 13.72 on 13 and 1786 DF, p-value: < 2.2e-16
Updated on 2008-06-04