response: nonhdl
covariates: age1 sex
SNP: 10Q11_21_MG_458
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-3.2753 -0.6925 -0.0791 0.6210 4.4929
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 3.629529 0.268753 13.505 < 2e-16
allele[notmissing] -0.015940 0.048600 -0.328 0.742965
z[notmissing, ]1 0.013533 0.003732 3.626 0.000296
z[notmissing, ]2 0.246670 0.093419 2.640 0.008351
as.factor(ruaco[notmissing])FIN-EAS_03 -0.119723 0.110909 -1.079 0.280525
as.factor(ruaco[notmissing])FIN-EAS_24 -0.393268 0.096940 -4.057 5.19e-05
as.factor(ruaco[notmissing])FIN-WES_03 -0.103845 0.112056 -0.927 0.354195
as.factor(ruaco[notmissing])FIN-WES_24 -0.259348 0.114210 -2.271 0.023278
as.factor(ruaco[notmissing])FRA-LIL_21 -0.215095 0.190843 -1.127 0.259860
as.factor(ruaco[notmissing])FRA-STR_21 -0.095226 0.155747 -0.611 0.541004
as.factor(ruaco[notmissing])FRA-TOU_21 -0.224363 0.184494 -1.216 0.224108
as.factor(ruaco[notmissing])SWE-NSW_02 0.713556 0.149895 4.760 2.09e-06
as.factor(ruaco[notmissing])SWE-NSW_03 0.543607 0.142668 3.810 0.000144
as.factor(ruaco[notmissing])UNK-BEL_21 0.061909 0.108540 0.570 0.568493
(Intercept) ***
allele[notmissing]
z[notmissing, ]1 ***
z[notmissing, ]2 **
as.factor(ruaco[notmissing])FIN-EAS_03
as.factor(ruaco[notmissing])FIN-EAS_24 ***
as.factor(ruaco[notmissing])FIN-WES_03
as.factor(ruaco[notmissing])FIN-WES_24 *
as.factor(ruaco[notmissing])FRA-LIL_21
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21
as.factor(ruaco[notmissing])SWE-NSW_02 ***
as.factor(ruaco[notmissing])SWE-NSW_03 ***
as.factor(ruaco[notmissing])UNK-BEL_21
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 1.068 on 1782 degrees of freedom
Multiple R-squared: 0.05566, Adjusted R-squared: 0.04877
F-statistic: 8.079 on 13 and 1782 DF, p-value: 5.773e-16
Updated on 2008-06-04