response: nonhdl
covariates: age1 sex
SNP: 19Q12_MG_446
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-3.22325 -0.70494 -0.07838 0.63429 4.43361
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 3.728159 0.269113 13.854 < 2e-16
allele[notmissing] 0.105076 0.050536 2.079 0.037739
z[notmissing, ]1 0.013564 0.003715 3.651 0.000269
z[notmissing, ]2 0.219375 0.093073 2.357 0.018530
as.factor(ruaco[notmissing])FIN-EAS_03 -0.145834 0.110290 -1.322 0.186249
as.factor(ruaco[notmissing])FIN-EAS_24 -0.416156 0.097146 -4.284 1.94e-05
as.factor(ruaco[notmissing])FIN-WES_03 -0.133808 0.111322 -1.202 0.229525
as.factor(ruaco[notmissing])FIN-WES_24 -0.266926 0.112589 -2.371 0.017856
as.factor(ruaco[notmissing])FRA-LIL_21 -0.120021 0.193609 -0.620 0.535394
as.factor(ruaco[notmissing])FRA-STR_21 -0.171098 0.155502 -1.100 0.271352
as.factor(ruaco[notmissing])FRA-TOU_21 -0.242542 0.179795 -1.349 0.177512
as.factor(ruaco[notmissing])SWE-NSW_02 0.647883 0.148701 4.357 1.39e-05
as.factor(ruaco[notmissing])SWE-NSW_03 0.582876 0.140300 4.154 3.42e-05
as.factor(ruaco[notmissing])UNK-BEL_21 0.041987 0.109321 0.384 0.700974
(Intercept) ***
allele[notmissing] *
z[notmissing, ]1 ***
z[notmissing, ]2 *
as.factor(ruaco[notmissing])FIN-EAS_03
as.factor(ruaco[notmissing])FIN-EAS_24 ***
as.factor(ruaco[notmissing])FIN-WES_03
as.factor(ruaco[notmissing])FIN-WES_24 *
as.factor(ruaco[notmissing])FRA-LIL_21
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21
as.factor(ruaco[notmissing])SWE-NSW_02 ***
as.factor(ruaco[notmissing])SWE-NSW_03 ***
as.factor(ruaco[notmissing])UNK-BEL_21
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 1.066 on 1774 degrees of freedom
Multiple R-squared: 0.05946, Adjusted R-squared: 0.05257
F-statistic: 8.627 on 13 and 1774 DF, p-value: < 2.2e-16
Updated on 2008-06-04