response: nonhdl
covariates: age1 sex
SNP: MIA3_MG_454
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-3.25871 -0.69274 -0.07701 0.62367 4.49870
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 3.660599 0.268844 13.616 < 2e-16
allele[notmissing] 0.027316 0.049672 0.550 0.582433
z[notmissing, ]1 0.013504 0.003726 3.624 0.000298
z[notmissing, ]2 0.223524 0.093499 2.391 0.016921
as.factor(ruaco[notmissing])FIN-EAS_03 -0.138712 0.111705 -1.242 0.214481
as.factor(ruaco[notmissing])FIN-EAS_24 -0.398336 0.096567 -4.125 3.88e-05
as.factor(ruaco[notmissing])FIN-WES_03 -0.104356 0.111525 -0.936 0.349546
as.factor(ruaco[notmissing])FIN-WES_24 -0.265100 0.113607 -2.333 0.019733
as.factor(ruaco[notmissing])FRA-LIL_21 -0.213421 0.190683 -1.119 0.263186
as.factor(ruaco[notmissing])FRA-STR_21 -0.176310 0.157101 -1.122 0.261899
as.factor(ruaco[notmissing])FRA-TOU_21 -0.212671 0.182089 -1.168 0.242984
as.factor(ruaco[notmissing])SWE-NSW_02 0.699594 0.146827 4.765 2.04e-06
as.factor(ruaco[notmissing])SWE-NSW_03 0.599069 0.141681 4.228 2.47e-05
as.factor(ruaco[notmissing])UNK-BEL_21 0.066179 0.108653 0.609 0.542544
(Intercept) ***
allele[notmissing]
z[notmissing, ]1 ***
z[notmissing, ]2 *
as.factor(ruaco[notmissing])FIN-EAS_03
as.factor(ruaco[notmissing])FIN-EAS_24 ***
as.factor(ruaco[notmissing])FIN-WES_03
as.factor(ruaco[notmissing])FIN-WES_24 *
as.factor(ruaco[notmissing])FRA-LIL_21
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21
as.factor(ruaco[notmissing])SWE-NSW_02 ***
as.factor(ruaco[notmissing])SWE-NSW_03 ***
as.factor(ruaco[notmissing])UNK-BEL_21
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 1.067 on 1786 degrees of freedom
Multiple R-squared: 0.05786, Adjusted R-squared: 0.051
F-statistic: 8.437 on 13 and 1786 DF, p-value: < 2.2e-16
Updated on 2008-06-04