response: nonhdl
covariates: age1 sex
SNP: MTHFD1L_MG_449
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-3.27020 -0.70083 -0.07963 0.62188 4.48971
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 3.538361 0.286233 12.362 < 2e-16
allele[notmissing] -0.111545 0.118229 -0.943 0.345566
z[notmissing, ]1 0.013440 0.003709 3.623 0.000299
z[notmissing, ]2 0.225607 0.092847 2.430 0.015201
as.factor(ruaco[notmissing])FIN-EAS_03 -0.140387 0.110291 -1.273 0.203228
as.factor(ruaco[notmissing])FIN-EAS_24 -0.403071 0.096547 -4.175 3.12e-05
as.factor(ruaco[notmissing])FIN-WES_03 -0.110088 0.111377 -0.988 0.323079
as.factor(ruaco[notmissing])FIN-WES_24 -0.260456 0.113714 -2.290 0.022111
as.factor(ruaco[notmissing])FRA-LIL_21 -0.210055 0.190814 -1.101 0.271115
as.factor(ruaco[notmissing])FRA-STR_21 -0.117390 0.154278 -0.761 0.446817
as.factor(ruaco[notmissing])FRA-TOU_21 -0.218947 0.182071 -1.203 0.229314
as.factor(ruaco[notmissing])SWE-NSW_02 0.694443 0.146664 4.735 2.36e-06
as.factor(ruaco[notmissing])SWE-NSW_03 0.594442 0.141212 4.210 2.69e-05
as.factor(ruaco[notmissing])UNK-BEL_21 0.062184 0.108323 0.574 0.565998
(Intercept) ***
allele[notmissing]
z[notmissing, ]1 ***
z[notmissing, ]2 *
as.factor(ruaco[notmissing])FIN-EAS_03
as.factor(ruaco[notmissing])FIN-EAS_24 ***
as.factor(ruaco[notmissing])FIN-WES_03
as.factor(ruaco[notmissing])FIN-WES_24 *
as.factor(ruaco[notmissing])FRA-LIL_21
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21
as.factor(ruaco[notmissing])SWE-NSW_02 ***
as.factor(ruaco[notmissing])SWE-NSW_03 ***
as.factor(ruaco[notmissing])UNK-BEL_21
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 1.067 on 1796 degrees of freedom
Multiple R-squared: 0.05801, Adjusted R-squared: 0.05119
F-statistic: 8.508 on 13 and 1796 DF, p-value: < 2.2e-16
Updated on 2008-06-04