response: (stroke3 %in% c('1','2')) 
covariates: dsmoker 
SNP: CELSR2_MG_438 
Call:
coxph(formula = y[notmissing] ~ allele[notmissing] + wz[notmissing, 
    selectedcovariates] + wruaco[notmissing] + strata(wsex[notmissing]) + 
    cluster(wdata$id[notmissing]), weights = weight[notmissing], 
    robust = TRUE)

  n= 2494 
                                      coef exp(coef) se(coef) robust se       z
allele[notmissing]                  0.0108     1.011   0.0865    0.0969  0.1115
wz[notmissing, selectedcovariates]  0.3098     1.363   0.1218    0.1327  2.3349
wruaco[notmissing]FIN-EAS_03        0.2130     1.237   0.2138    0.2276  0.9360
wruaco[notmissing]FIN-EAS_24       -0.0945     0.910   0.1814    0.2053 -0.4604
wruaco[notmissing]FIN-WES_03       -0.1758     0.839   0.2283    0.2435 -0.7221
wruaco[notmissing]FIN-WES_24       -0.1877     0.829   0.1937    0.2216 -0.8469
wruaco[notmissing]FRA-LIL_21       -0.9507     0.386   0.4707    0.5005 -1.8995
wruaco[notmissing]FRA-STR_21       -0.9980     0.369   0.4391    0.4627 -2.1570
wruaco[notmissing]FRA-TOU_21       -1.2195     0.295   0.5260    0.5577 -2.1866
wruaco[notmissing]SWE-NSW_02       -0.0085     0.992   0.2760    0.3089 -0.0275
wruaco[notmissing]SWE-NSW_03        0.0817     1.085   0.2563    0.2792  0.2926
wruaco[notmissing]UNK-BEL_21       -0.7847     0.456   0.3573    0.3751 -2.0918
                                       p
allele[notmissing]                 0.910
wz[notmissing, selectedcovariates] 0.020
wruaco[notmissing]FIN-EAS_03       0.350
wruaco[notmissing]FIN-EAS_24       0.650
wruaco[notmissing]FIN-WES_03       0.470
wruaco[notmissing]FIN-WES_24       0.400
wruaco[notmissing]FRA-LIL_21       0.057
wruaco[notmissing]FRA-STR_21       0.031
wruaco[notmissing]FRA-TOU_21       0.029
wruaco[notmissing]SWE-NSW_02       0.980
wruaco[notmissing]SWE-NSW_03       0.770
wruaco[notmissing]UNK-BEL_21       0.036

                                   exp(coef) exp(-coef) lower .95 upper .95
allele[notmissing]                     1.011      0.989     0.836     1.222
wz[notmissing, selectedcovariates]     1.363      0.734     1.051     1.768
wruaco[notmissing]FIN-EAS_03           1.237      0.808     0.792     1.933
wruaco[notmissing]FIN-EAS_24           0.910      1.099     0.608     1.360
wruaco[notmissing]FIN-WES_03           0.839      1.192     0.520     1.352
wruaco[notmissing]FIN-WES_24           0.829      1.206     0.537     1.280
wruaco[notmissing]FRA-LIL_21           0.386      2.588     0.145     1.031
wruaco[notmissing]FRA-STR_21           0.369      2.713     0.149     0.913
wruaco[notmissing]FRA-TOU_21           0.295      3.386     0.099     0.881
wruaco[notmissing]SWE-NSW_02           0.992      1.009     0.541     1.816
wruaco[notmissing]SWE-NSW_03           1.085      0.922     0.628     1.875
wruaco[notmissing]UNK-BEL_21           0.456      2.192     0.219     0.952

Rsquare= 0.015   (max possible= 0.925 )
Likelihood ratio test= 37.9  on 12 df,   p=0.000157
Wald test            = 32.4  on 12 df,   p=0.00120
Score (logrank) test = 36  on 12 df,   p=0.000324,   Robust = 34.4  p=0.000592

  (Note: the likelihood ratio and score tests assume independence of
     observations within a cluster, the Wald and robust score tests do not).

Updated on 2008-06-04