response: (stroke3=='1') 
covariates: strage3 sex 
SNP: 10Q11_21_MG_458 

Call:
glm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing, 
    ] + as.factor(ruaco[notmissing]), family = binomial(link = "logit"))

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.6617  -0.4749  -0.3484  -0.1752   2.8222  

Coefficients:
                                         Estimate Std. Error z value Pr(>|z|)  
(Intercept)                              -6.39050    2.74271  -2.330   0.0198 *
allele[notmissing]                        0.17486    0.40887   0.428   0.6689  
z[notmissing, ]1                          0.04046    0.03543   1.142   0.2535  
z[notmissing, ]2                          1.44334    1.15692   1.248   0.2122  
as.factor(ruaco[notmissing])FIN-EAS_03   -0.80830    1.09420  -0.739   0.4601  
as.factor(ruaco[notmissing])FIN-EAS_24   -1.68879    1.03940  -1.625   0.1042  
as.factor(ruaco[notmissing])FIN-WES_03   -0.47266    1.09362  -0.432   0.6656  
as.factor(ruaco[notmissing])FIN-WES_24   -1.30241    1.04930  -1.241   0.2145  
as.factor(ruaco[notmissing])FRA-LIL_21  -15.10532 1767.45012  -0.009   0.9932  
as.factor(ruaco[notmissing])FRA-STR_21  -15.08933 1611.11059  -0.009   0.9925  
as.factor(ruaco[notmissing])FRA-TOU_21  -15.12804 1973.43481  -0.008   0.9939  
as.factor(ruaco[notmissing])SWE-NSW_02   -0.01180    1.10626  -0.011   0.9915  
as.factor(ruaco[notmissing])SWE-NSW_03   -0.05957    1.16318  -0.051   0.9592  
as.factor(ruaco[notmissing])UNK-BEL_21    0.25511    1.13943   0.224   0.8228  
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 216.00  on 418  degrees of freedom
Residual deviance: 198.25  on 405  degrees of freedom
AIC: 226.25

Number of Fisher Scoring iterations: 16

Updated on 2008-06-04