response: (stroke3=='1') 
covariates: strage3 sex 
SNP: 19Q12_MG_446 

Call:
glm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing, 
    ] + as.factor(ruaco[notmissing]), family = binomial(link = "logit"))

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.6524  -0.4817  -0.3525  -0.1729   2.8760  

Coefficients:
                                         Estimate Std. Error z value Pr(>|z|)  
(Intercept)                              -6.30751    2.67558  -2.357   0.0184 *
allele[notmissing]                       -0.08264    0.40499  -0.204   0.8383  
z[notmissing, ]1                          0.03872    0.03452   1.122   0.2620  
z[notmissing, ]2                          1.56564    1.14192   1.371   0.1704  
as.factor(ruaco[notmissing])FIN-EAS_03   -0.80385    1.09004  -0.737   0.4609  
as.factor(ruaco[notmissing])FIN-EAS_24   -0.98489    0.76209  -1.292   0.1962  
as.factor(ruaco[notmissing])FIN-WES_03   -0.49832    1.09287  -0.456   0.6484  
as.factor(ruaco[notmissing])FIN-WES_24   -1.39518    1.04536  -1.335   0.1820  
as.factor(ruaco[notmissing])FRA-LIL_21  -15.05567 1766.37982  -0.009   0.9932  
as.factor(ruaco[notmissing])FRA-STR_21  -15.12655 1612.89141  -0.009   0.9925  
as.factor(ruaco[notmissing])FRA-TOU_21  -15.23792 1976.93349  -0.008   0.9939  
as.factor(ruaco[notmissing])SWE-NSW_02   -0.14611    1.09873  -0.133   0.8942  
as.factor(ruaco[notmissing])SWE-NSW_03    0.02966    1.17008   0.025   0.9798  
as.factor(ruaco[notmissing])UNK-BEL_21    0.31555    1.13722   0.277   0.7814  
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 221.09  on 418  degrees of freedom
Residual deviance: 204.27  on 405  degrees of freedom
AIC: 232.27

Number of Fisher Scoring iterations: 16

Updated on 2008-06-04