response: systm
covariates: age1 sex
SNP: 10Q11_21_MG_458
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-56.476 -12.423 -2.158 12.321 89.447
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 105.33682 4.58378 22.980 < 2e-16
allele[notmissing] -0.78484 0.83105 -0.944 0.345094
z[notmissing, ]1 0.59240 0.06391 9.270 < 2e-16
z[notmissing, ]2 -1.07401 1.58533 -0.677 0.498195
as.factor(ruaco[notmissing])FIN-EAS_03 7.47510 1.79745 4.159 3.35e-05
as.factor(ruaco[notmissing])FIN-EAS_24 5.16987 1.63135 3.169 0.001554
as.factor(ruaco[notmissing])FIN-WES_03 2.45861 1.92899 1.275 0.202627
as.factor(ruaco[notmissing])FIN-WES_24 2.72648 1.90309 1.433 0.152124
as.factor(ruaco[notmissing])FRA-LIL_21 0.91562 3.44052 0.266 0.790170
as.factor(ruaco[notmissing])FRA-STR_21 -3.30977 2.80055 -1.182 0.237427
as.factor(ruaco[notmissing])FRA-TOU_21 -10.73207 2.94145 -3.649 0.000271
as.factor(ruaco[notmissing])SWE-NSW_02 -2.75125 2.55483 -1.077 0.281673
as.factor(ruaco[notmissing])SWE-NSW_03 -1.46293 2.59537 -0.564 0.573049
as.factor(ruaco[notmissing])UNK-BEL_21 -5.18383 1.87481 -2.765 0.005749
(Intercept) ***
allele[notmissing]
z[notmissing, ]1 ***
z[notmissing, ]2
as.factor(ruaco[notmissing])FIN-EAS_03 ***
as.factor(ruaco[notmissing])FIN-EAS_24 **
as.factor(ruaco[notmissing])FIN-WES_03
as.factor(ruaco[notmissing])FIN-WES_24
as.factor(ruaco[notmissing])FRA-LIL_21
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21 ***
as.factor(ruaco[notmissing])SWE-NSW_02
as.factor(ruaco[notmissing])SWE-NSW_03
as.factor(ruaco[notmissing])UNK-BEL_21 **
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 18.69 on 1843 degrees of freedom
Multiple R-squared: 0.09207, Adjusted R-squared: 0.08567
F-statistic: 14.38 on 13 and 1843 DF, p-value: < 2.2e-16
Updated on 2008-06-04