response: systm
covariates: age1 sex
SNP: MIA3_MG_454
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-56.185 -12.627 -2.437 12.148 90.025
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 104.61703 4.61191 22.684 < 2e-16
allele[notmissing] 0.61168 0.86346 0.708 0.47879
z[notmissing, ]1 0.59323 0.06396 9.275 < 2e-16
z[notmissing, ]2 -0.55021 1.59131 -0.346 0.72956
as.factor(ruaco[notmissing])FIN-EAS_03 7.93887 1.82088 4.360 1.37e-05
as.factor(ruaco[notmissing])FIN-EAS_24 5.33757 1.63224 3.270 0.00109
as.factor(ruaco[notmissing])FIN-WES_03 2.86073 1.92326 1.487 0.13707
as.factor(ruaco[notmissing])FIN-WES_24 2.92193 1.90406 1.535 0.12506
as.factor(ruaco[notmissing])FRA-LIL_21 0.98608 3.44065 0.287 0.77445
as.factor(ruaco[notmissing])FRA-STR_21 -2.66257 2.82935 -0.941 0.34680
as.factor(ruaco[notmissing])FRA-TOU_21 -10.52603 2.88401 -3.650 0.00027
as.factor(ruaco[notmissing])SWE-NSW_02 -2.86628 2.50961 -1.142 0.25355
as.factor(ruaco[notmissing])SWE-NSW_03 -0.87044 2.55022 -0.341 0.73290
as.factor(ruaco[notmissing])UNK-BEL_21 -4.99871 1.87942 -2.660 0.00789
(Intercept) ***
allele[notmissing]
z[notmissing, ]1 ***
z[notmissing, ]2
as.factor(ruaco[notmissing])FIN-EAS_03 ***
as.factor(ruaco[notmissing])FIN-EAS_24 **
as.factor(ruaco[notmissing])FIN-WES_03
as.factor(ruaco[notmissing])FIN-WES_24
as.factor(ruaco[notmissing])FRA-LIL_21
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21 ***
as.factor(ruaco[notmissing])SWE-NSW_02
as.factor(ruaco[notmissing])SWE-NSW_03
as.factor(ruaco[notmissing])UNK-BEL_21 **
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 18.69 on 1844 degrees of freedom
Multiple R-squared: 0.09169, Adjusted R-squared: 0.08528
F-statistic: 14.32 on 13 and 1844 DF, p-value: < 2.2e-16
Updated on 2008-06-04