response: systm
covariates: age1 sex
SNP: MTHFD1L_MG_449
Call:
lm(formula = response[notmissing] ~ allele[notmissing] + z[notmissing,
] + as.factor(ruaco[notmissing]))
Residuals:
Min 1Q Median 3Q Max
-56.596 -12.498 -2.312 12.258 90.104
Coefficients:
Estimate Std. Error t value Pr(>|t|)
(Intercept) 104.95786 4.90513 21.398 < 2e-16
allele[notmissing] 0.28977 2.03169 0.143 0.886602
z[notmissing, ]1 0.59187 0.06355 9.313 < 2e-16
z[notmissing, ]2 -0.92936 1.57457 -0.590 0.555108
as.factor(ruaco[notmissing])FIN-EAS_03 7.76635 1.79338 4.331 1.57e-05
as.factor(ruaco[notmissing])FIN-EAS_24 5.21608 1.62856 3.203 0.001384
as.factor(ruaco[notmissing])FIN-WES_03 2.70394 1.91708 1.410 0.158576
as.factor(ruaco[notmissing])FIN-WES_24 2.76872 1.90033 1.457 0.145294
as.factor(ruaco[notmissing])FRA-LIL_21 0.91037 3.43724 0.265 0.791150
as.factor(ruaco[notmissing])FRA-STR_21 -3.45358 2.76994 -1.247 0.212626
as.factor(ruaco[notmissing])FRA-TOU_21 -10.62123 2.87809 -3.690 0.000230
as.factor(ruaco[notmissing])SWE-NSW_02 -3.06615 2.50096 -1.226 0.220358
as.factor(ruaco[notmissing])SWE-NSW_03 -1.16593 2.54028 -0.459 0.646305
as.factor(ruaco[notmissing])UNK-BEL_21 -5.28906 1.86456 -2.837 0.004609
(Intercept) ***
allele[notmissing]
z[notmissing, ]1 ***
z[notmissing, ]2
as.factor(ruaco[notmissing])FIN-EAS_03 ***
as.factor(ruaco[notmissing])FIN-EAS_24 **
as.factor(ruaco[notmissing])FIN-WES_03
as.factor(ruaco[notmissing])FIN-WES_24
as.factor(ruaco[notmissing])FRA-LIL_21
as.factor(ruaco[notmissing])FRA-STR_21
as.factor(ruaco[notmissing])FRA-TOU_21 ***
as.factor(ruaco[notmissing])SWE-NSW_02
as.factor(ruaco[notmissing])SWE-NSW_03
as.factor(ruaco[notmissing])UNK-BEL_21 **
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
Residual standard error: 18.67 on 1857 degrees of freedom
Multiple R-squared: 0.09265, Adjusted R-squared: 0.0863
F-statistic: 14.59 on 13 and 1857 DF, p-value: < 2.2e-16
Updated on 2008-06-04