response: basemi1==1
covariates: age1 sex ruaco
SNP: rs1333049
Call:
glm(formula = basemi1 ~ rs1333049 * as.factor(ruaco) + age1 +
sex, family = binomial(link = "logit"), data = ccset, offset = log(1/prob))
Deviance Residuals:
Min 1Q Median 3Q Max
-0.8483 -0.4937 -0.4092 -0.2905 2.9278
Coefficients:
Estimate Std. Error z value Pr(>|z|)
(Intercept) -14.825693 0.783583 -18.920 < 2e-16 ***
rs1333049 0.143724 0.133729 1.075 0.2825
as.factor(ruaco)FIN-EAS_03 1.100857 0.271856 4.049 5.13e-05 ***
as.factor(ruaco)FIN-EAS_24 0.418659 0.202133 2.071 0.0383 *
as.factor(ruaco)FIN-WES_03 0.026596 0.372221 0.071 0.9430
as.factor(ruaco)FIN-WES_24 -0.095973 0.240575 -0.399 0.6899
as.factor(ruaco)FRA-LIL_21 -2.152622 1.023806 -2.103 0.0355 *
as.factor(ruaco)FRA-STR_21 -2.433004 1.017919 -2.390 0.0168 *
as.factor(ruaco)FRA-TOU_21 -14.165544 310.240031 -0.046 0.9636
as.factor(ruaco)SWE-NSW_02 0.007883 0.534916 0.015 0.9882
as.factor(ruaco)SWE-NSW_03 -0.755428 0.397068 -1.903 0.0571 .
as.factor(ruaco)UNK-BEL_21 -0.558541 0.377221 -1.481 0.1387
age1 0.145922 0.011077 13.174 < 2e-16 ***
sex 1.815845 0.268980 6.751 1.47e-11 ***
rs1333049:as.factor(ruaco)FIN-EAS_03 -0.055971 0.338752 -0.165 0.8688
rs1333049:as.factor(ruaco)FIN-EAS_24 -0.106607 0.269549 -0.395 0.6925
rs1333049:as.factor(ruaco)FIN-WES_03 -0.042702 0.483488 -0.088 0.9296
rs1333049:as.factor(ruaco)FIN-WES_24 -0.119728 0.334451 -0.358 0.7204
rs1333049:as.factor(ruaco)FRA-LIL_21 0.161153 1.540494 0.105 0.9167
rs1333049:as.factor(ruaco)FRA-STR_21 0.060213 1.433431 0.042 0.9665
rs1333049:as.factor(ruaco)FRA-TOU_21 13.379204 310.241786 0.043 0.9656
rs1333049:as.factor(ruaco)SWE-NSW_02 0.104199 0.747648 0.139 0.8892
rs1333049:as.factor(ruaco)SWE-NSW_03 0.011426 0.529214 0.022 0.9828
rs1333049:as.factor(ruaco)UNK-BEL_21 -0.457862 0.505117 -0.906 0.3647
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
(Dispersion parameter for binomial family taken to be 1)
Null deviance: 2074.6 on 2747 degrees of freedom
Residual deviance: 1614.4 on 2724 degrees of freedom
(80 observations deleted due to missingness)
AIC: 1662.4
Number of Fisher Scoring iterations: 15
Updated on 2008-02-27